| Ligne 2 : | Ligne 2 : | ||
|Main_Picture=FlyPi_IMG_7640.JPG | |Main_Picture=FlyPi_IMG_7640.JPG | ||
|Licences=Attribution (CC BY) | |Licences=Attribution (CC BY) | ||
| − | |Description=FlyPi is a 'Do-It-Yourself' all in one biology lab that can be used for optical microscopy, diagnostics, perform state of the art methods of research in Neurosciences, such as Optogenetics, Calcium Imaging and Fluorescence microscopy ( | + | |Description=FlyPi is a 'Do-It-Yourself' all in one biology lab that can be used for optical microscopy, diagnostics, perform state of the art methods of research in Neurosciences, such as Optogenetics, Calcium Imaging and Fluorescence microscopy (Maia Chagas, 2017). |
|Area=Science and Biology | |Area=Science and Biology | ||
|Type=Creation | |Type=Creation | ||
| Ligne 99 : | Ligne 99 : | ||
{{ {{tntn|Tuto Step}} | {{ {{tntn|Tuto Step}} | ||
|Step_Title=Modularity | |Step_Title=Modularity | ||
| − | |Step_Content=1- Modularity: | + | |Step_Content=1- Modularity: Broadly speaking, is the degree to which a system's components may be separated and recombined, often with the benefit of flexibility and variety in use.<sup id="cite_ref-MWModular_1-0" class="reference">[https://en.wikipedia.org/wiki/Modularity#cite_note-MWModular-1 <nowiki>[1]</nowiki>]</sup> Things like cars, computers, solar panels, biological cells are all examples of modularity. Principles behind modularity posit that systems should be built form cohesive loosely coupled components, sometimes referred to as modules, with a defined function or purpose. |
| + | |||
| + | The FlyPi is designed in a modular fashion to optimize its diversity in capabilities. It's important to point out that all modules do not have to be added which can save time and money. If desired, modules can be added at any point. | ||
| + | |||
| + | To begin, I determined which modules I wanted to have and left out the servo motor that provided some (x,y) axis movement for the slide. My samples were large enough that manual movement would be sufficient. | ||
|Step_Picture_00=FlyPi_IMG_7835_1_.JPG | |Step_Picture_00=FlyPi_IMG_7835_1_.JPG | ||
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{{ {{tntn|Tuto Step}} | {{ {{tntn|Tuto Step}} | ||
|Step_Title=Gathering Materials & Creating Parts | |Step_Title=Gathering Materials & Creating Parts | ||
| − | |Step_Content=2- Gathering materials: | + | |Step_Content=2- Gathering materials: Due to modularity, not all parts are necessary for basic functionality. (The repository has detailed bill of material files) |
Electronic parts can be ordered from this kitspace page (lists have been conveniently compiled in various online market shopping carts): | Electronic parts can be ordered from this kitspace page (lists have been conveniently compiled in various online market shopping carts): | ||
| Ligne 116 : | Ligne 120 : | ||
3D print files can be found in the files tab | 3D print files can be found in the files tab | ||
| + | |||
| + | The PCB board is custom made for Promethius Science | ||
}} | }} | ||
{{ {{tntn|Tuto Step}} | {{ {{tntn|Tuto Step}} | ||
Version du 5 novembre 2018 à 10:14
FlyPi is a 'Do-It-Yourself' all in one biology lab that can be used for optical microscopy, diagnostics, perform state of the art methods of research in Neurosciences, such as Optogenetics, Calcium Imaging and Fluorescence microscopy (Maia Chagas, 2017).
Difficulté
Moyen
Durée
28 heure(s)
Catégories
Science & Biologie
Coût
100 EUR (€)
Introduction
In this tutorial, I share the journey of how I built the FlyPi biology tool, without any previous electronics experience, so I could feed my insatiable urge to see how things work. Microscopy offers a lens to explore each visual frontier with its new wonderful perspectives and illumination of a minuscule life regularly unobserved. This is an amazing experiences for anyone curious of what lies beneath our immediate visual capabilities. One main constraint for curious students, researchers and/or educators to look deeper into the micro world, is access to effective scientific tools. This is likely due to high prices set by development under a patent/scarcity methodology. Building your own FlyPi is a relatively easy and cost effective way to to get around this limiting factor. FlyPi is an all-in-one biology lab with powerful “off-the-shelf” electronic elements (Raspberry Pi & Arduino nano). It's modularity offers a fast, effective and low cost way to have better experimental control by customizing for specific needs and most importantly enables accessibility for exploration and research of the micro world around. Just putting it together is a great learning experience for everyone not immediately comfortable with electronics. Some People have even begun to join scientific efforts in pursuing solutions to their local problems!
Steps
1- Modularity: Loosely combined Parts can be comb
2- Gathering materials: - Show the options to buy parts from kitspace, but also add links to the original github repository, stating that due to modularity, not all parts are necessary for basic functionality. (on the repository there are more detailed bill of material files)
3- Building hardware: Explain module flexibilities
4- Software Installation: How to install useful software on SD card
5- Launching FlyPi program: Putting it all together to start collecting image data!
Erreur lors de la création de la miniature : convert: unable to extend cache `/var/www/dokitfarm/sites/Wikifab/images/b/b6/FlyPi_IMG_7643.JPG': File too large @ error/cache.c/OpenPixelCache/4006. convert: no images defined `/tmp/transform_48b621eb7203.jpg' @ error/convert.c/ConvertImageCommand/3258. Error code: 1
Matériaux
Monitor
Computer mouse - USB
Keyboard - USB
3D print files (.stl) : Under 'Files' tab above
Custom PCB (Principle Component Board parts can be found on: https://kitspace.org/boards/github.com/prometheus-science/flypi/ )
Outils
Soldering Iron, Solder
Computer with:
- ability to connect SD card
- internet Connection
3D printer
Étape 1 - Modularity
1- Modularity: Broadly speaking, is the degree to which a system's components may be separated and recombined, often with the benefit of flexibility and variety in use.[1] Things like cars, computers, solar panels, biological cells are all examples of modularity. Principles behind modularity posit that systems should be built form cohesive loosely coupled components, sometimes referred to as modules, with a defined function or purpose.
The FlyPi is designed in a modular fashion to optimize its diversity in capabilities. It's important to point out that all modules do not have to be added which can save time and money. If desired, modules can be added at any point.
To begin, I determined which modules I wanted to have and left out the servo motor that provided some (x,y) axis movement for the slide. My samples were large enough that manual movement would be sufficient.
Étape 2 - Gathering Materials & Creating Parts
2- Gathering materials: Due to modularity, not all parts are necessary for basic functionality. (The repository has detailed bill of material files)
Electronic parts can be ordered from this kitspace page (lists have been conveniently compiled in various online market shopping carts):
https://kitspace.org/boards/github.com/prometheus-science/flypi/
3D print files can be found in the files tab
The PCB board is custom made for Promethius Science
Étape 3 - Building hardware
3- Building hardware: Explain module flexibilities
Étape 4 - Software Installation
4- Software Installation: How to install useful software on SD card
Étape 5 - Launching the FlyPi
5- Launching FlyPi program: Putting it all together to start collecting image data!
Draft
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